Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 AC009053.2-201ENST00000563701 2365 ntBASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TCRBV3S1A0A5B6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 AC008694.1-202ENST00000636953 945 ntBASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 AC012313.1-201ENST00000593393 3059 ntBASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRBV3S1A0A5B6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV3S1A0A5B6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.74■□□□□ 0.43
TCRBV3S1A0A5B6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV3S1A0A5B6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV3S1A0A5B6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV3S1A0A5B6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV3S1A0A5B6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TCRBV3S1A0A5B6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms