Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 CROCCP5-201ENST00000436658 830 ntBASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 AC060766.5-201ENST00000590539 871 ntBASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 PNMA6B-201ENST00000538162 1200 ntBASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 AC120498.8-201ENST00000614275 531 ntBASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 AC009113.1-201ENST00000570267 2443 ntBASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV21A0A0B4J279 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 IKBKGP1-201ENST00000612193 1073 ntBASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 AC104581.1-202ENST00000635932 2618 ntBASIC14.11□□□□□ -0.15
TRAV21A0A0B4J279 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV21A0A0B4J279 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms