Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 AC099791.1-201ENST00000416440 715 ntBASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 YBX1P1-201ENST00000445822 960 ntBASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV12-1A0A0B4J245 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 AC018553.1-201ENST00000616682 1458 ntBASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 AC008764.7-201ENST00000593779 1081 ntBASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV12-1A0A0B4J245 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 AC104417.2-201ENST00000562989 1793 ntBASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 AC027682.1-201ENST00000562846 899 ntBASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 AL354811.1-201ENST00000610286 706 ntBASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 PKD1P5-201ENST00000532415 10291 ntBASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV12-1A0A0B4J245 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms