Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 AP003097.1-201ENST00000530657 1135 ntBASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 C1QL1P1-201ENST00000568105 661 ntBASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 NEFHP1-201ENST00000412845 2629 ntBASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-2A0A0B4J237 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 RNA5SP413-201ENST00000516373 109 ntBASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 AL160286.2-201ENST00000567150 934 ntBASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 AC233263.1-201ENST00000578059 224 ntBASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 MTDHP1-201ENST00000605323 784 ntBASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 AC069544.1-201ENST00000609399 999 ntBASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-2A0A0B4J237 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-2A0A0B4J237 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms