Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.22□□□□□ -0.61
TRAV7A0A075B6U4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRAV7A0A075B6U4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TRAV7A0A075B6U4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRAV7A0A075B6U4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.22□□□□□ -0.61
TRAV7A0A075B6U4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRAV7A0A075B6U4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 AL365209.1-201ENST00000624418 6473 ntBASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 BX005040.4-201ENST00000637145 1518 ntBASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 REST-206ENST00000612429 1376 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 REST-207ENST00000616975 1370 ntTSL 5 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 RPS2P7-201ENST00000447334 885 ntBASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
TRAV7A0A075B6U4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.62
TRAV7A0A075B6U4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 MIR3665-201ENST00000578708 105 ntBASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 AC009102.2-201ENST00000606772 1639 ntBASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRAV7A0A075B6U4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRAV7A0A075B6U4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms