Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 AC092435.4-201ENST00000623012 4159 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SKP55-201ENST00000364888 307 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-53P-201ENST00000365367 106 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RNA5SP187-201ENST00000384400 119 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 AL161626.1-201ENST00000441480 490 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU7-119P-201ENST00000459279 63 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 SCARNA6-201ENST00000515982 265 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 Y_RNA.697-201ENST00000516776 113 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL25P-201ENST00000583862 260 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 AL121932.1-201ENST00000605542 214 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 AC006111.3-201ENST00000622137 383 ntBASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 AL161431.1-201ENST00000618966 4205 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-1260P-201ENST00000362944 107 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU4-58P-201ENST00000363192 141 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR152-201ENST00000385212 87 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 HBG2-204ENST00000444587 307 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL778P-201ENST00000607160 297 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 uc_338.37-201ENST00000620113 186 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 LINC02035-201ENST00000610128 5476 ntBASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP3-3Q9BYR6 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AC009779.8-201ENST00000641684 4384 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-838P-201ENST00000363399 108 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 U3.27-201ENST00000391237 200 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AC090114.1-201ENST00000393266 448 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SKP148-201ENST00000410179 275 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 MED15P9-201ENST00000424716 533 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AC108039.2-201ENST00000440214 359 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 CRYGGP-201ENST00000443337 145 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 DBIL5P2-201ENST00000443827 253 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 MYL6P4-201ENST00000477911 453 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 RPL34P29-201ENST00000491411 325 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 Y_RNA.809-201ENST00000516058 95 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AL049872.1-201ENST00000556323 322 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AC005070.2-201ENST00000604391 260 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU7-10P-201ENST00000607194 63 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AC138904.2-201ENST00000614412 107 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AP000346.3-201ENST00000622821 210 ntBASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms