RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 CHIC1Q5VXU3 224 aa8.21□□□□□ -1.1
SCARNA11.3-201ENST00000517276 AEBP2Q6ZN18 517 aaPredicted RBP7.99□□□□□ -1.13
SCARNA11.3-201ENST00000517276 PHF23Q9BUL5 403 aaPredicted RBP7.35□□□□□ -1.23
SCARNA11.3-201ENST00000517276 PLPPR3Q6T4P5 718 aa6.84□□□□□ -1.31
SCARNA11.3-201ENST00000517276 EHMT2Q96KQ7 1210 aa6.81□□□□□ -1.32
SCARNA11.3-201ENST00000517276 KCNA4P22459 653 aa6.62□□□□□ -1.35
SCARNA11.3-201ENST00000517276 SENP3Q9H4L4 574 aaPredicted RBP6.59□□□□□ -1.35
SCARNA11.3-201ENST00000517276 ADRA2BP18089 450 aa6.53□□□□□ -1.36
SCARNA11.3-201ENST00000517276 CSRNP3Q8WYN3 585 aa6.46□□□□□ -1.38
SCARNA11.3-201ENST00000517276 SLC24A1O60721 1099 aa6.39□□□□□ -1.39
SCARNA11.3-201ENST00000517276 SLC4A1APQ9BWU0 796 aaKnown RBP6.35□□□□□ -1.39
SCARNA11.3-201ENST00000517276 PPP6R1Q9UPN7 881 aa6.34□□□□□ -1.39
SCARNA11.3-201ENST00000517276 RTN4Q9NQC3 1192 aaKnown RBP6.19□□□□□ -1.42
SCARNA11.3-201ENST00000517276 PPP4R3CPQ6ZMV5 832 aa6.15□□□□□ -1.42
SCARNA11.3-201ENST00000517276 FOXD1Q16676 465 aa6.14□□□□□ -1.43
SCARNA11.3-201ENST00000517276 ZBTB22O15209 634 aa6.12□□□□□ -1.43
SCARNA11.3-201ENST00000517276 AMER1Q5JTC6 1135 aaPredicted RBP6.09□□□□□ -1.43
SCARNA11.3-201ENST00000517276 NPM3O75607 178 aaKnown RBP6.05□□□□□ -1.44
SCARNA11.3-201ENST00000517276 NCBP3Q53F19 620 aaKnown RBP6.05□□□□□ -1.44
SCARNA11.3-201ENST00000517276 PIAS4Q8N2W9 510 aaPredicted RBP5.9□□□□□ -1.46
SCARNA11.3-201ENST00000517276 FOXD4L1Q9NU39 408 aa5.88□□□□□ -1.47
SCARNA11.3-201ENST00000517276 CNKSR2Q8WXI2 1034 aa5.82□□□□□ -1.48
SCARNA11.3-201ENST00000517276 FKBP8Q14318 412 aa5.81□□□□□ -1.48
SCARNA11.3-201ENST00000517276 PRKCSHP14314 528 aaPredicted RBP5.71□□□□□ -1.5
SCARNA11.3-201ENST00000517276 DNAJC5BQ9UF47 199 aa5.66□□□□□ -1.5
SCARNA11.3-201ENST00000517276 SCAF1Q9H7N4 1312 aaKnown RBP5.65□□□□□ -1.51
SCARNA11.3-201ENST00000517276 MAPK8IP2Q13387 824 aaPredicted RBP5.64□□□□□ -1.51
SCARNA11.3-201ENST00000517276 PLCB2Q00722 1185 aa5.63□□□□□ -1.51
SCARNA11.3-201ENST00000517276 SLC4A2P04920 1241 aa5.62□□□□□ -1.51
SCARNA11.3-201ENST00000517276 HAP1P54257 671 aaPredicted RBP5.6□□□□□ -1.51
SCARNA11.3-201ENST00000517276 RNF216Q9NWF9 866 aaPredicted RBP5.57□□□□□ -1.52
SCARNA11.3-201ENST00000517276 TAOK2Q9UL54 1235 aa5.57□□□□□ -1.52
SCARNA11.3-201ENST00000517276 ATXN8OSP0DMR3 200 aa5.55□□□□□ -1.52
SCARNA11.3-201ENST00000517276 BCANQ96GW7 911 aa5.55□□□□□ -1.52
SCARNA11.3-201ENST00000517276 MYCNP04198 464 aaPredicted RBP5.53□□□□□ -1.52
SCARNA11.3-201ENST00000517276 TPRNQ4KMQ1 711 aa5.51□□□□□ -1.53
SCARNA11.3-201ENST00000517276 DCAF8L2P0C7V8 631 aa5.48□□□□□ -1.53
SCARNA11.3-201ENST00000517276 ATF5Q9Y2D1 282 aaPredicted RBP5.46□□□□□ -1.54
SCARNA11.3-201ENST00000517276 VSIG10Q8N0Z9 540 aa5.44□□□□□ -1.54
SCARNA11.3-201ENST00000517276 HOXD11P31277 338 aaPredicted RBP5.43□□□□□ -1.54
SCARNA11.3-201ENST00000517276 KDM2AQ9Y2K7 1162 aa5.42□□□□□ -1.54
SCARNA11.3-201ENST00000517276 FBLN2P98095 1184 aa5.41□□□□□ -1.54
SCARNA11.3-201ENST00000517276 TIMELESSQ9UNS1 1208 aa5.41□□□□□ -1.54
SCARNA11.3-201ENST00000517276 TULP1O00294 542 aaPredicted RBP5.36□□□□□ -1.55
SCARNA11.3-201ENST00000517276 MSH5O43196 834 aa5.36□□□□□ -1.55
SCARNA11.3-201ENST00000517276 DMRT2Q9Y5R5 561 aa5.36□□□□□ -1.55
SCARNA11.3-201ENST00000517276 VASPP50552 380 aaPredicted RBP5.35□□□□□ -1.55
SCARNA11.3-201ENST00000517276 PKD2Q13563 968 aa5.35□□□□□ -1.55
SCARNA11.3-201ENST00000517276 FBXO3Q9UK99 471 aa5.35□□□□□ -1.55
SCARNA11.3-201ENST00000517276 PAXIP1Q6ZW49 1069 aaPredicted RBP5.33□□□□□ -1.56
SCARNA11.3-201ENST00000517276 IFNLR1Q8IU57 520 aaPredicted RBP5.33□□□□□ -1.56
SCARNA11.3-201ENST00000517276 DAXXQ9UER7 740 aaPredicted RBP5.33□□□□□ -1.56
SCARNA11.3-201ENST00000517276 CFAP44Q96MT7 982 aa5.32□□□□□ -1.56
SCARNA11.3-201ENST00000517276 NPM1P06748 294 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCARNA11.3-201ENST00000517276 SPDYE4A6NLX3 237 aa5.29□□□□□ -1.56
SCARNA11.3-201ENST00000517276 TSHZ2Q9NRE2 1034 aa5.28□□□□□ -1.56
SCARNA11.3-201ENST00000517276 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.28□□□□□ -1.56
SCARNA11.3-201ENST00000517276 BBXQ8WY36 941 aaPredicted RBP5.27□□□□□ -1.57
SCARNA11.3-201ENST00000517276 GTF3C3Q9Y5Q9 886 aa5.27□□□□□ -1.57
SCARNA11.3-201ENST00000517276 ARXQ96QS3 562 aa5.26□□□□□ -1.57
SCARNA11.3-201ENST00000517276 PROM2Q8N271 834 aa5.24□□□□□ -1.57
SCARNA11.3-201ENST00000517276 ECM2O94769 699 aaPredicted RBP5.22□□□□□ -1.57
SCARNA11.3-201ENST00000517276 MKRN4PQ13434 485 aaPredicted RBP5.22□□□□□ -1.57
SCARNA11.3-201ENST00000517276 ZNF219Q9P2Y4 722 aaPredicted RBP5.22□□□□□ -1.57
SCARNA11.3-201ENST00000517276 SAMD1Q6SPF0 538 aaPredicted RBP5.21□□□□□ -1.58
SCARNA11.3-201ENST00000517276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCARNA11.3-201ENST00000517276 U3KPZ7 1027 aaPredicted RBP5.21□□□□□ -1.58
SCARNA11.3-201ENST00000517276 SPRYD3Q8NCJ5 442 aa5.19□□□□□ -1.58
SCARNA11.3-201ENST00000517276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.18□□□□□ -1.58
SCARNA11.3-201ENST00000517276 RGL2O15211 777 aa5.18□□□□□ -1.58
SCARNA11.3-201ENST00000517276 NBR1Q14596 966 aa5.18□□□□□ -1.58
SCARNA11.3-201ENST00000517276 HNRNPUL2Q1KMD3 747 aaKnown RBP5.18□□□□□ -1.58
SCARNA11.3-201ENST00000517276 DCAF8L1A6NGE4 600 aa5.17□□□□□ -1.58
SCARNA11.3-201ENST00000517276 TMEM132AQ24JP5 1023 aa5.16□□□□□ -1.58
SCARNA11.3-201ENST00000517276 HOMEZQ8IX15 550 aa5.16□□□□□ -1.58
SCARNA11.3-201ENST00000517276 KLHL34Q8N239 644 aa5.14□□□□□ -1.59
SCARNA11.3-201ENST00000517276 SPOCK2Q92563 424 aa5.14□□□□□ -1.59
SCARNA11.3-201ENST00000517276 C14orf37Q86TY3 774 aa5.13□□□□□ -1.59
SCARNA11.3-201ENST00000517276 DNAJC5Q9H3Z4 198 aa5.12□□□□□ -1.59
SCARNA11.3-201ENST00000517276 CHGAP10645 457 aaKnown RBP5.11□□□□□ -1.59
SCARNA11.3-201ENST00000517276 ERICH6Q7L0X2 663 aa5.1□□□□□ -1.59
SCARNA11.3-201ENST00000517276 SUPT5HO00267 1087 aaKnown RBP5.05□□□□□ -1.6
SCARNA11.3-201ENST00000517276 CIZ1Q9ULV3 898 aaPredicted RBP5.03□□□□□ -1.6
SCARNA11.3-201ENST00000517276 PLCD3Q8N3E9 789 aa5.01□□□□□ -1.61
SCARNA11.3-201ENST00000517276 PODXL2Q9NZ53 605 aa5□□□□□ -1.61
SCARNA11.3-201ENST00000517276 POLA2Q14181 598 aa4.99□□□□□ -1.61
SCARNA11.3-201ENST00000517276 NKX1-1Q15270 411 aaPredicted RBP4.99□□□□□ -1.61
SCARNA11.3-201ENST00000517276 HS6ST3Q8IZP7 471 aa4.99□□□□□ -1.61
SCARNA11.3-201ENST00000517276 TRHP20396 242 aaPredicted RBP4.98□□□□□ -1.61
SCARNA11.3-201ENST00000517276 APLP2Q06481 763 aa4.98□□□□□ -1.61
SCARNA11.3-201ENST00000517276 MIER1Q8N108 512 aa4.97□□□□□ -1.61
SCARNA11.3-201ENST00000517276 RNF25Q96BH1 459 aaPredicted RBP4.96□□□□□ -1.62
SCARNA11.3-201ENST00000517276 GTPBP6O43824 516 aaPredicted RBP4.95□□□□□ -1.62
SCARNA11.3-201ENST00000517276 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
SCARNA11.3-201ENST00000517276 SPINK5Q9NQ38 1064 aaPredicted RBP4.95□□□□□ -1.62
SCARNA11.3-201ENST00000517276 STAG3Q9UJ98 1225 aa4.95□□□□□ -1.62
SCARNA11.3-201ENST00000517276 UBTFP17480 764 aaKnown RBP4.93□□□□□ -1.62
SCARNA11.3-201ENST00000517276 RANGAP1P46060 587 aaPredicted RBP4.93□□□□□ -1.62
SCARNA11.3-201ENST00000517276 LMOD2Q6P5Q4 547 aa4.92□□□□□ -1.62
SCARNA11.3-201ENST00000517276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms