Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 APP-206ENST00000359726 3294 ntTSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-9Q9BYQ8 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC2.21□□□□□ -2.05
KRTAP4-9Q9BYQ8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 HYDIN2-203ENST00000614586 13885 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RNA5SP273-201ENST00000362484 113 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 MIR7-2-201ENST00000384970 110 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 MIR195-201ENST00000385194 87 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 MIR143-201ENST00000385300 106 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RPS29P7-201ENST00000439662 171 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 IGHV5-78-201ENST00000450948 295 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AL157398.1-201ENST00000452981 186 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SDC4P-201ENST00000453285 601 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RNU7-24P-201ENST00000458867 62 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RNU7-74P-201ENST00000459104 62 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RN7SL751P-201ENST00000473281 284 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RN7SL727P-201ENST00000482164 296 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RN7SL346P-201ENST00000491561 294 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 GM2AP2-201ENST00000491764 562 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SNORA31.1-201ENST00000515993 133 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SNORA31.5-201ENST00000516190 133 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 Y_RNA.667-201ENST00000516212 107 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RNA5SP438-201ENST00000516561 112 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC015688.6-201ENST00000577737 104 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC016629.2-201ENST00000597341 199 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 MIR8055-201ENST00000610739 97 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 RPSAP73-201ENST00000614820 330 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC243994.1-201ENST00000618627 109 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC073308.1-201ENST00000623696 305 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC007993.1-201ENST00000621298 2430 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC104964.2-201ENST00000562242 4641 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 TTC41P-205ENST00000551270 3963 ntBASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-9Q9BYQ8 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-9Q9BYQ8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms