Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 PRORSD1P-201ENST00000295112 541 ntBASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 AL353807.1-201ENST00000427475 662 ntBASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 AL359736.2-201ENST00000621992 437 ntBASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 AL160286.2-201ENST00000567150 934 ntBASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 SDHAP1-207ENST00000440850 2000 ntBASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DRB4X5D2U9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ABHD17AP1-201ENST00000358206 933 ntBASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 NIFKP9-201ENST00000419265 221 ntBASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 AP002982.1-201ENST00000492365 877 ntBASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 HTR7P1-201ENST00000538670 1336 ntBASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 RARRES2P10-201ENST00000564312 460 ntBASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 AL353708.3-201ENST00000610272 989 ntBASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms