Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 AC036111.1-201ENST00000533973 1582 ntBASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 SPDYE15P-201ENST00000424157 909 ntBASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 RASA4DP-201ENST00000460726 1199 ntBASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 VENTXP5-201ENST00000523979 775 ntBASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 AC083849.1-201ENST00000615227 514 ntBASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 FEM1AP3-201ENST00000403722 1741 ntBASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.62■□□□□ 0.57
HS3ST3A1Q9Y663 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 AC024243.1-201ENST00000609234 778 ntBASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HS3ST3A1Q9Y663 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 AL109659.2-201ENST00000606809 1674 ntBASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 AL512353.2-201ENST00000448759 1962 ntBASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HS3ST3A1Q9Y663 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms