Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 RCN1P1-201ENST00000400413 996 ntBASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 TSPY21P-201ENST00000433481 731 ntBASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A3BPQ9Y5P4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 TNXA-203ENST00000507684 2038 ntBASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 TSPY14P-201ENST00000303979 915 ntBASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A3BPQ9Y5P4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 EGLN1P1-201ENST00000531623 762 ntBASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 AC005363.2-201ENST00000618631 242 ntBASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A3BPQ9Y5P4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A3BPQ9Y5P4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.21■□□□□ 0.99
COL4A3BPQ9Y5P4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms