Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KRT19P1-201ENST00000405746 1186 ntBASIC17.97■□□□□ 0.47
AP4S1Q9Y587 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 AC010536.3-201ENST00000620306 533 ntBASIC17.97■□□□□ 0.47
AP4S1Q9Y587 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.97■□□□□ 0.47
AP4S1Q9Y587 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
AP4S1Q9Y587 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 AC123595.1-201ENST00000440769 1046 ntBASIC17.96■□□□□ 0.47
AP4S1Q9Y587 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 AC110285.6-201ENST00000617652 491 ntBASIC17.96■□□□□ 0.47
AP4S1Q9Y587 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4S1Q9Y587 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP4S1Q9Y587 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP4S1Q9Y587 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
AP4S1Q9Y587 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP4S1Q9Y587 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.95■□□□□ 0.46
AP4S1Q9Y587 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4S1Q9Y587 AC126763.1-201ENST00000552015 2118 ntBASIC17.95■□□□□ 0.46
AP4S1Q9Y587 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 AC007322.4-201ENST00000509611 723 ntBASIC17.94■□□□□ 0.46
AP4S1Q9Y587 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 RARRES2P4-201ENST00000514074 484 ntBASIC17.94■□□□□ 0.46
AP4S1Q9Y587 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4S1Q9Y587 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms