Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 AC007322.3-201ENST00000426526 701 ntBASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHTOPQ9Y3Y2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHTOPQ9Y3Y2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 PGM5P4-201ENST00000421970 445 ntBASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CHTOPQ9Y3Y2 KRT8P17-201ENST00000453110 1448 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms