Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA9Q9UGM1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 KRT8P41-201ENST00000533985 1514 ntBASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 CD177P1-201ENST00000606252 935 ntBASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 AP006294.2-201ENST00000641667 209 ntBASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA9Q9UGM1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA9Q9UGM1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 MIR718-201ENST00000390190 70 ntBASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 FAM197Y1-201ENST00000421178 764 ntBASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 AC008550.1-201ENST00000511500 884 ntBASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 AL049637.2-201ENST00000641778 930 ntBASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA9Q9UGM1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 AC120498.9-201ENST00000339021 3867 ntBASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 RCC2P6-201ENST00000526625 1557 ntBASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA9Q9UGM1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 AC004951.3-201ENST00000418645 1148 ntBASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms