Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CALCOCO1Q9P1Z2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALCOCO1Q9P1Z2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CALCOCO1Q9P1Z2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CALCOCO1Q9P1Z2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALCOCO1Q9P1Z2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.69■□□□□ 0.9
CALCOCO1Q9P1Z2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 AC093484.2-201ENST00000580996 2166 ntBASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.68■□□□□ 0.9
CALCOCO1Q9P1Z2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 MIR718-201ENST00000390190 70 ntBASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.67■□□□□ 0.9
CALCOCO1Q9P1Z2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 AC099398.1-201ENST00000567919 2776 ntBASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 POM121L13P-201ENST00000422362 380 ntBASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 PHGDH-210ENST00000641115 1638 ntBASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALCOCO1Q9P1Z2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 AC135050.7-201ENST00000624508 2218 ntBASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALCOCO1Q9P1Z2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms