Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.62■□□□□ 0.41
HPF1Q9NWY4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 PRSS44-201ENST00000515154 1146 ntBASIC17.62■□□□□ 0.41
HPF1Q9NWY4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 AC116562.4-202ENST00000641738 218 ntBASIC17.62■□□□□ 0.41
HPF1Q9NWY4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HPF1Q9NWY4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 CKBP1-201ENST00000565489 1086 ntBASIC17.61■□□□□ 0.41
HPF1Q9NWY4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HPF1Q9NWY4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 AC113347.1-201ENST00000413321 391 ntBASIC17.6■□□□□ 0.41
HPF1Q9NWY4 SLC25A1P2-201ENST00000430693 912 ntBASIC17.6■□□□□ 0.41
HPF1Q9NWY4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.6■□□□□ 0.41
HPF1Q9NWY4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPF1Q9NWY4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 TREX1-205ENST00000625293 1783 ntBASIC17.59■□□□□ 0.41
HPF1Q9NWY4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 KRT8P11-201ENST00000409686 1436 ntBASIC17.59■□□□□ 0.41
HPF1Q9NWY4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 RCN1P1-201ENST00000400413 996 ntBASIC17.59■□□□□ 0.41
HPF1Q9NWY4 AL137013.1-201ENST00000432946 1228 ntBASIC17.59■□□□□ 0.41
HPF1Q9NWY4 ECEL1P2-202ENST00000465689 757 ntBASIC17.59■□□□□ 0.41
HPF1Q9NWY4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HPF1Q9NWY4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms