Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 KRT18P29-201ENST00000397031 1267 ntBASIC17.17■□□□□ 0.34
HINT3Q9NQE9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 AL354751.1-201ENST00000412768 1863 ntBASIC17.16■□□□□ 0.34
HINT3Q9NQE9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 ANO7L1-203ENST00000602586 1720 ntBASIC17.16■□□□□ 0.34
HINT3Q9NQE9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.16■□□□□ 0.34
HINT3Q9NQE9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HINT3Q9NQE9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 TUBB8P6-201ENST00000436895 1288 ntBASIC17.15■□□□□ 0.34
HINT3Q9NQE9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 AC006058.3-201ENST00000606217 1069 ntBASIC17.15■□□□□ 0.34
HINT3Q9NQE9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HINT3Q9NQE9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
HINT3Q9NQE9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 ITM2C-210ENST00000620962 501 ntBASIC17.14■□□□□ 0.33
HINT3Q9NQE9 AC083906.6-201ENST00000641366 219 ntBASIC17.14■□□□□ 0.33
HINT3Q9NQE9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms