Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.14■□□□□ 0.49
PIF1Q9H611 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PIF1Q9H611 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.14■□□□□ 0.49
PIF1Q9H611 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.14■□□□□ 0.49
PIF1Q9H611 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PIF1Q9H611 LTB4R2-202ENST00000528054 3092 ntBASIC18.14■□□□□ 0.49
PIF1Q9H611 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.13■□□□□ 0.49
PIF1Q9H611 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PIF1Q9H611 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.13■□□□□ 0.49
PIF1Q9H611 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.13■□□□□ 0.49
PIF1Q9H611 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.13■□□□□ 0.49
PIF1Q9H611 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.13■□□□□ 0.49
PIF1Q9H611 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.13■□□□□ 0.49
PIF1Q9H611 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.13■□□□□ 0.49
PIF1Q9H611 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.13■□□□□ 0.49
PIF1Q9H611 PCDHB18P-201ENST00000524813 2368 ntBASIC18.13■□□□□ 0.49
PIF1Q9H611 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PIF1Q9H611 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.13■□□□□ 0.49
PIF1Q9H611 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PIF1Q9H611 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 SLC29A4P1-201ENST00000398760 971 ntBASIC18.12■□□□□ 0.49
PIF1Q9H611 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.12■□□□□ 0.49
PIF1Q9H611 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.12■□□□□ 0.49
PIF1Q9H611 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 TSPY6P-201ENST00000448518 926 ntBASIC18.12■□□□□ 0.49
PIF1Q9H611 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.12■□□□□ 0.49
PIF1Q9H611 AC005829.2-201ENST00000571422 1056 ntBASIC18.12■□□□□ 0.49
PIF1Q9H611 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.12■□□□□ 0.49
PIF1Q9H611 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.12■□□□□ 0.49
PIF1Q9H611 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 AC093525.10-201ENST00000625130 1569 ntBASIC18.12■□□□□ 0.49
PIF1Q9H611 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.12■□□□□ 0.49
PIF1Q9H611 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PIF1Q9H611 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.12■□□□□ 0.49
PIF1Q9H611 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.12■□□□□ 0.49
PIF1Q9H611 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.11■□□□□ 0.49
PIF1Q9H611 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
PIF1Q9H611 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
PIF1Q9H611 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PIF1Q9H611 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms