Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 AC013268.1-206ENST00000638368 961 ntBASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 AC112229.1-201ENST00000639295 961 ntBASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 AC108860.2-201ENST00000562760 2183 ntBASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNF1Q9H3M0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNF1Q9H3M0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.7■□□□□ 0.91
KCNF1Q9H3M0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
KCNF1Q9H3M0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.7■□□□□ 0.91
KCNF1Q9H3M0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNF1Q9H3M0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.69■□□□□ 0.9
KCNF1Q9H3M0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms