Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 AC079598.2-202ENST00000546624 1451 ntBASIC17.61■□□□□ 0.41
UBQLN3Q9H347 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 AC011506.1-201ENST00000474329 610 ntBASIC17.6■□□□□ 0.41
UBQLN3Q9H347 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 AL161938.1-201ENST00000569833 2180 ntBASIC17.6■□□□□ 0.41
UBQLN3Q9H347 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN3Q9H347 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 AC087499.1-201ENST00000418141 1075 ntBASIC17.59■□□□□ 0.41
UBQLN3Q9H347 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 Z85996.1-201ENST00000494644 937 ntBASIC17.59■□□□□ 0.41
UBQLN3Q9H347 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN3Q9H347 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 AL138781.2-201ENST00000617896 1843 ntBASIC17.58■□□□□ 0.41
UBQLN3Q9H347 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 RCC2P6-201ENST00000526625 1557 ntBASIC17.58■□□□□ 0.41
UBQLN3Q9H347 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
UBQLN3Q9H347 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 AP000525.1-201ENST00000608286 694 ntBASIC17.58■□□□□ 0.4
UBQLN3Q9H347 DGCR10-201ENST00000609839 495 ntBASIC17.58■□□□□ 0.4
UBQLN3Q9H347 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 AC141586.3-201ENST00000562166 1838 ntBASIC17.58■□□□□ 0.4
UBQLN3Q9H347 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms