Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL109923.1-201ENST00000618799 583 ntBASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 POM121L13P-201ENST00000422362 380 ntBASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2J3Q9H1A7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 AC135050.7-201ENST00000624508 2218 ntBASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 AC098934.4-201ENST00000564127 592 ntBASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 AL390961.4-201ENST00000623958 2535 ntBASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2J3Q9H1A7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms