Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 AL137784.2-201ENST00000607332 1000 ntBASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 AC026185.1-201ENST00000445748 174 ntBASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 AL050303.2-201ENST00000619798 666 ntBASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD4Q9H0A8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 MIR935-201ENST00000401179 91 ntBASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD4Q9H0A8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD4Q9H0A8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.77■□□□□ 0.27
COMMD4Q9H0A8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD4Q9H0A8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD4Q9H0A8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
COMMD4Q9H0A8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD4Q9H0A8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 AC026471.1-201ENST00000564629 3026 ntBASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD4Q9H0A8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms