Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 SCARNA2-201ENST00000458748 420 ntBASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AL049840.3-201ENST00000602669 611 ntBASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AL356488.2-201ENST00000602755 427 ntBASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AC005229.4-201ENST00000610085 2198 ntBASIC18.08■□□□□ 0.49
CNTNAP3Q9BZ76 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3Q9BZ76 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3Q9BZ76 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3Q9BZ76 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.08■□□□□ 0.49
CNTNAP3Q9BZ76 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 YBX2P1-201ENST00000394192 760 ntBASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 PAWRP1-201ENST00000451083 565 ntBASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3Q9BZ76 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 AC027601.4-201ENST00000611259 610 ntBASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3Q9BZ76 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 PTBP1P-201ENST00000554374 1601 ntBASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 DNAJB3-201ENST00000446806 729 ntBASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 AC011467.4-201ENST00000594891 528 ntBASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 MIR7706-201ENST00000613747 67 ntBASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.06■□□□□ 0.48
CNTNAP3Q9BZ76 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms