Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 KRT8P20-201ENST00000423953 1409 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ABALON-201ENST00000629058 1903 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 KRT87P-202ENST00000534226 1464 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PRORSD1P-202ENST00000563365 2154 ntBASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 AC012313.1-201ENST00000593393 3059 ntBASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SAPCD2P1-201ENST00000395413 1184 ntBASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SRR-208ENST00000576848 588 ntTSL 4 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms