Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
LRRC3Q9BY71 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 TREX1-205ENST00000625293 1783 ntBASIC19.82■□□□□ 0.76
LRRC3Q9BY71 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC3Q9BY71 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 AL023284.2-201ENST00000405850 579 ntBASIC19.81■□□□□ 0.76
LRRC3Q9BY71 SPDYE13P-201ENST00000445314 798 ntBASIC19.81■□□□□ 0.76
LRRC3Q9BY71 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 ZNF444P1-201ENST00000559497 298 ntBASIC19.81■□□□□ 0.76
LRRC3Q9BY71 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC3Q9BY71 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC3Q9BY71 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LRRC3Q9BY71 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms