Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO3Q9BXY4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 AC239809.2-201ENST00000415381 517 ntBASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 RPS2P4-201ENST00000476944 856 ntBASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 AL445675.2-201ENST00000620291 557 ntBASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
RSPO3Q9BXY4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RSPO3Q9BXY4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 AC006058.3-201ENST00000606217 1069 ntBASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 AC018470.1-201ENST00000624790 3129 ntBASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.46■□□□□ 0.39
RSPO3Q9BXY4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RSPO3Q9BXY4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 HEIH-201ENST00000623091 1652 ntBASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 AC005332.8-201ENST00000622750 2735 ntBASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.45■□□□□ 0.38
RSPO3Q9BXY4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms