Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 MIPEPP3-201ENST00000412105 444 ntBASIC16.3■□□□□ 0.2
NICN1Q9BSH3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 MIR5787-201ENST00000611784 55 ntBASIC16.3■□□□□ 0.2
NICN1Q9BSH3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NICN1Q9BSH3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 BICD1-207ENST00000551848 1962 ntBASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.29■□□□□ 0.2
NICN1Q9BSH3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 IKBKGP1-201ENST00000612193 1073 ntBASIC16.29■□□□□ 0.2
NICN1Q9BSH3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 AL121906.2-201ENST00000621597 723 ntBASIC16.29■□□□□ 0.2
NICN1Q9BSH3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NICN1Q9BSH3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms