Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H2AAQ96QV6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 TEX21P-204ENST00000641479 1693 ntBASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 SDHAP1-207ENST00000440850 2000 ntBASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 KRT16P5-201ENST00000455284 522 ntBASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H2AAQ96QV6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 AL160286.2-201ENST00000567150 934 ntBASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 C1QL1P1-201ENST00000568105 661 ntBASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 RN7SL471P-201ENST00000580476 299 ntBASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 AC110285.5-201ENST00000611501 352 ntBASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H2AAQ96QV6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.46■□□□□ 0.22
HIST1H2AAQ96QV6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
HIST1H2AAQ96QV6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AAQ96QV6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms