Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
DUX3Q96PT4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DUX3Q96PT4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
DUX3Q96PT4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.77□□□□□ -0.04
DUX3Q96PT4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.77□□□□□ -0.04
DUX3Q96PT4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.77□□□□□ -0.04
DUX3Q96PT4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
DUX3Q96PT4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.77□□□□□ -0.05
DUX3Q96PT4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.77□□□□□ -0.05
DUX3Q96PT4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.77□□□□□ -0.05
DUX3Q96PT4 AC116562.4-202ENST00000641738 218 ntBASIC14.77□□□□□ -0.05
DUX3Q96PT4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
DUX3Q96PT4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.77□□□□□ -0.05
DUX3Q96PT4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
DUX3Q96PT4 SDHAP1-207ENST00000440850 2000 ntBASIC14.76□□□□□ -0.05
DUX3Q96PT4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC073508.3-201ENST00000619697 1419 ntBASIC14.76□□□□□ -0.05
DUX3Q96PT4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC104417.2-201ENST00000562989 1793 ntBASIC14.76□□□□□ -0.05
DUX3Q96PT4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 CCR12P-201ENST00000446203 998 ntBASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC104076.2-201ENST00000448912 469 ntBASIC14.76□□□□□ -0.05
DUX3Q96PT4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AFG3L1P-217ENST00000557444 2447 ntBASIC14.76□□□□□ -0.05
DUX3Q96PT4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
DUX3Q96PT4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
DUX3Q96PT4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
DUX3Q96PT4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.75□□□□□ -0.05
DUX3Q96PT4 ZNF815P-204ENST00000434898 1737 ntBASIC14.75□□□□□ -0.05
DUX3Q96PT4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUX3Q96PT4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.75□□□□□ -0.05
DUX3Q96PT4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUX3Q96PT4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
DUX3Q96PT4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUX3Q96PT4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
DUX3Q96PT4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
DUX3Q96PT4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms