Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 AL031963.3-201ENST00000606441 850 ntBASIC14.35□□□□□ -0.11
AP1S3Q96PC3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 CYP21A1P-202ENST00000354927 1481 ntBASIC14.35□□□□□ -0.11
AP1S3Q96PC3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 KRT19P1-201ENST00000405746 1186 ntBASIC14.34□□□□□ -0.11
AP1S3Q96PC3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S3Q96PC3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
AP1S3Q96PC3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AP1S3Q96PC3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
AP1S3Q96PC3 KRT8P20-201ENST00000423953 1409 ntBASIC14.33□□□□□ -0.11
AP1S3Q96PC3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.33□□□□□ -0.11
AP1S3Q96PC3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.33□□□□□ -0.11
AP1S3Q96PC3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 AL139246.5-201ENST00000606645 996 ntBASIC14.33□□□□□ -0.12
AP1S3Q96PC3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP1S3Q96PC3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms