Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 C1QL1P1-201ENST00000568105 661 ntBASIC17.95■□□□□ 0.46
COL21A1Q96P44 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 HCG11-201ENST00000411553 5696 ntBASIC17.95■□□□□ 0.46
COL21A1Q96P44 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL21A1Q96P44 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL21A1Q96P44 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 SDHAP1-207ENST00000440850 2000 ntBASIC17.94■□□□□ 0.46
COL21A1Q96P44 AC104417.2-201ENST00000562989 1793 ntBASIC17.94■□□□□ 0.46
COL21A1Q96P44 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 RARRES2P10-201ENST00000564312 460 ntBASIC17.94■□□□□ 0.46
COL21A1Q96P44 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.94■□□□□ 0.46
COL21A1Q96P44 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL21A1Q96P44 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 HTR7P1-201ENST00000538670 1336 ntBASIC17.93■□□□□ 0.46
COL21A1Q96P44 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL21A1Q96P44 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL21A1Q96P44 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms