Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RITA1Q96K30 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.26■□□□□ 0.03
RITA1Q96K30 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.26■□□□□ 0.03
RITA1Q96K30 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
RITA1Q96K30 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.26■□□□□ 0.03
RITA1Q96K30 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.25■□□□□ 0.03
RITA1Q96K30 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RITA1Q96K30 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.25■□□□□ 0.03
RITA1Q96K30 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.25■□□□□ 0.03
RITA1Q96K30 TSPY7P-201ENST00000431358 1114 ntBASIC15.25■□□□□ 0.03
RITA1Q96K30 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.25■□□□□ 0.03
RITA1Q96K30 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.25■□□□□ 0.03
RITA1Q96K30 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 AC026271.3-201ENST00000571884 352 ntBASIC15.25■□□□□ 0.03
RITA1Q96K30 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.25■□□□□ 0.03
RITA1Q96K30 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RITA1Q96K30 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.25■□□□□ 0.03
RITA1Q96K30 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.25■□□□□ 0.03
RITA1Q96K30 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RITA1Q96K30 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RITA1Q96K30 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
RITA1Q96K30 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.24■□□□□ 0.03
RITA1Q96K30 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RITA1Q96K30 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.24■□□□□ 0.03
RITA1Q96K30 FAM207BP-201ENST00000447172 505 ntBASIC15.24■□□□□ 0.03
RITA1Q96K30 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 AC116562.2-201ENST00000507042 360 ntBASIC15.24■□□□□ 0.03
RITA1Q96K30 NUDT16P1-203ENST00000513809 620 ntBASIC15.24■□□□□ 0.03
RITA1Q96K30 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 REXO1L10P-201ENST00000615707 1290 ntBASIC15.24■□□□□ 0.03
RITA1Q96K30 REXO1L12P-201ENST00000622156 912 ntBASIC15.24■□□□□ 0.03
RITA1Q96K30 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.24■□□□□ 0.03
RITA1Q96K30 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RITA1Q96K30 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.24■□□□□ 0.03
RITA1Q96K30 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RITA1Q96K30 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RITA1Q96K30 FSCN1P1-201ENST00000568912 1481 ntBASIC15.23■□□□□ 0.03
RITA1Q96K30 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.23■□□□□ 0.03
RITA1Q96K30 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RITA1Q96K30 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RITA1Q96K30 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.23■□□□□ 0.03
RITA1Q96K30 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.23■□□□□ 0.03
RITA1Q96K30 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.23■□□□□ 0.03
RITA1Q96K30 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.23■□□□□ 0.03
RITA1Q96K30 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.23■□□□□ 0.03
RITA1Q96K30 AP001412.1-201ENST00000608405 714 ntBASIC15.23■□□□□ 0.03
RITA1Q96K30 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms