Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 AL512353.2-201ENST00000448759 1962 ntBASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 AC093525.10-201ENST00000625130 1569 ntBASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTHRC1Q96CG8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CTHRC1Q96CG8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 MIR1238-201ENST00000408483 83 ntBASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 AL390955.1-201ENST00000428694 934 ntBASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 AL023803.3-201ENST00000615559 522 ntBASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 AC068587.9-201ENST00000641814 219 ntBASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 HEIH-201ENST00000623091 1652 ntBASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 AC093503.3-201ENST00000624917 2352 ntBASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTHRC1Q96CG8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 SLC25A1P2-201ENST00000430693 912 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms