Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AL031598.1-201ENST00000561511 1773 ntBASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AC091390.4-202ENST00000476426 537 ntBASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AC142381.4-202ENST00000563973 229 ntBASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AC026271.3-201ENST00000571884 352 ntBASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 NEFHP1-201ENST00000412845 2629 ntBASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 AL031985.4-201ENST00000642138 673 ntBASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 AL512353.2-201ENST00000448759 1962 ntBASIC18.5■□□□□ 0.55
RHBDF1Q96CC6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AC004951.3-201ENST00000418645 1148 ntBASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 AC083906.6-201ENST00000641366 219 ntBASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDF1Q96CC6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 Z98044.1-201ENST00000632503 1764 ntBASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 GCSHP5-201ENST00000443090 522 ntBASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 PRSS44-201ENST00000515154 1146 ntBASIC18.48■□□□□ 0.55
RHBDF1Q96CC6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms