Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 AC091874.3-201ENST00000512672 1195 ntBASIC18.26■□□□□ 0.51
VPS33AQ96AX1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 BICD1-207ENST00000551848 1962 ntBASIC18.25■□□□□ 0.51
VPS33AQ96AX1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 AC083906.2-201ENST00000511578 360 ntBASIC18.25■□□□□ 0.51
VPS33AQ96AX1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 AC092118.2-201ENST00000613495 667 ntBASIC18.25■□□□□ 0.51
VPS33AQ96AX1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS33AQ96AX1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 AL137784.2-201ENST00000607332 1000 ntBASIC18.24■□□□□ 0.51
VPS33AQ96AX1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 AC092368.3-202ENST00000574180 1591 ntBASIC18.24■□□□□ 0.51
VPS33AQ96AX1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS33AQ96AX1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 KRT18P16-201ENST00000510337 1294 ntBASIC18.23■□□□□ 0.51
VPS33AQ96AX1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms