Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AL049812.1-201ENST00000432563 2267 ntBASIC18.29■□□□□ 0.52
UBE2E3Q969T4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.28■□□□□ 0.52
UBE2E3Q969T4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 AC091390.4-202ENST00000476426 537 ntBASIC18.28■□□□□ 0.52
UBE2E3Q969T4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2E3Q969T4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 KRT8P11-201ENST00000409686 1436 ntBASIC18.27■□□□□ 0.52
UBE2E3Q969T4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 RPS2P55-201ENST00000397318 883 ntBASIC18.27■□□□□ 0.52
UBE2E3Q969T4 AC107956.1-201ENST00000494359 873 ntBASIC18.27■□□□□ 0.52
UBE2E3Q969T4 CD177P1-201ENST00000606252 935 ntBASIC18.27■□□□□ 0.52
UBE2E3Q969T4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 MIR6786-201ENST00000616843 113 ntBASIC18.27■□□□□ 0.52
UBE2E3Q969T4 AC130371.2-201ENST00000619443 611 ntBASIC18.27■□□□□ 0.52
UBE2E3Q969T4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
UBE2E3Q969T4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBE2E3Q969T4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBE2E3Q969T4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBE2E3Q969T4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBE2E3Q969T4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 FAM197Y1-201ENST00000421178 764 ntBASIC18.26■□□□□ 0.51
UBE2E3Q969T4 FAM207BP-201ENST00000447172 505 ntBASIC18.26■□□□□ 0.51
UBE2E3Q969T4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 TMEM191A-211ENST00000637163 1067 ntBASIC18.26■□□□□ 0.51
UBE2E3Q969T4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 AC006333.2-201ENST00000607957 2099 ntBASIC18.26■□□□□ 0.51
UBE2E3Q969T4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBE2E3Q969T4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2E3Q969T4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms