Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 AC093525.10-201ENST00000625130 1569 ntBASIC16.75■□□□□ 0.27
TMEM54Q969K7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 MFAP1P1-201ENST00000442257 1255 ntBASIC16.74■□□□□ 0.27
TMEM54Q969K7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM54Q969K7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM54Q969K7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 RBM17P1-201ENST00000453646 1190 ntBASIC16.73■□□□□ 0.27
TMEM54Q969K7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.73■□□□□ 0.27
TMEM54Q969K7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 AC093503.3-201ENST00000624917 2352 ntBASIC16.73■□□□□ 0.27
TMEM54Q969K7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM54Q969K7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM54Q969K7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 AP005242.2-201ENST00000580065 1175 ntBASIC16.72■□□□□ 0.27
TMEM54Q969K7 MIR4497-201ENST00000583208 89 ntBASIC16.72■□□□□ 0.27
TMEM54Q969K7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM54Q969K7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM54Q969K7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms