Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 RCC2P6-201ENST00000526625 1557 ntBASIC17.92■□□□□ 0.46
TM9SF4Q92544 BX119927.1-201ENST00000636596 1552 ntBASIC17.92■□□□□ 0.46
TM9SF4Q92544 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 FAM207BP-201ENST00000447172 505 ntBASIC17.92■□□□□ 0.46
TM9SF4Q92544 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 NTF6B-201ENST00000591913 560 ntBASIC17.92■□□□□ 0.46
TM9SF4Q92544 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.92■□□□□ 0.46
TM9SF4Q92544 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 SLC25A1P2-201ENST00000430693 912 ntBASIC17.91■□□□□ 0.46
TM9SF4Q92544 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.91■□□□□ 0.46
TM9SF4Q92544 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF4Q92544 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF4Q92544 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.9■□□□□ 0.46
TM9SF4Q92544 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 AC104076.2-201ENST00000448912 469 ntBASIC17.9■□□□□ 0.46
TM9SF4Q92544 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 AL512604.3-201ENST00000569583 964 ntBASIC17.9■□□□□ 0.46
TM9SF4Q92544 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 AC093503.3-201ENST00000624917 2352 ntBASIC17.9■□□□□ 0.46
TM9SF4Q92544 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.9■□□□□ 0.46
TM9SF4Q92544 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF4Q92544 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF4Q92544 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TM9SF4Q92544 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF4Q92544 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF4Q92544 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF4Q92544 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.89■□□□□ 0.45
TM9SF4Q92544 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TM9SF4Q92544 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms