Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 MIR4785-201ENST00000585005 73 ntBASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 AC141586.3-201ENST00000562166 1838 ntBASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.89■□□□□ 0.93
ATRIPQ8WXE1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 AC087499.1-201ENST00000418141 1075 ntBASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 AC018553.1-201ENST00000616682 1458 ntBASIC20.88■□□□□ 0.93
ATRIPQ8WXE1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 AL049637.2-201ENST00000641778 930 ntBASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 AL135905.2-201ENST00000584934 1404 ntBASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 WIZP1-201ENST00000531444 2299 ntBASIC20.87■□□□□ 0.93
ATRIPQ8WXE1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 HLA-G-202ENST00000376815 851 ntBASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 HLA-G-203ENST00000376818 1127 ntBASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATRIPQ8WXE1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATRIPQ8WXE1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.85■□□□□ 0.93
ATRIPQ8WXE1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATRIPQ8WXE1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.85■□□□□ 0.93
ATRIPQ8WXE1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATRIPQ8WXE1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms