Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 KRT8P8-201ENST00000434750 1448 ntBASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKAP2Q8WWK9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKAP2Q8WWK9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CKAP2Q8WWK9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 RARRES2P6-201ENST00000567333 442 ntBASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CKAP2Q8WWK9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms