Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 BID-214ENST00000617586 542 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 OR10C1-204ENST00000622521 1039 ntBASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 AC092437.1-201ENST00000624794 1048 ntBASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 AC083906.6-201ENST00000641366 219 ntBASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IL1Q8TBN0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 AC073210.2-201ENST00000430369 194 ntBASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 AL137784.2-201ENST00000607332 1000 ntBASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ANO7L1-203ENST00000602586 1720 ntBASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 AC020916.1-201ENST00000587762 1774 ntBASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RAB3IL1Q8TBN0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IL1Q8TBN0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 AC005332.8-201ENST00000622750 2735 ntBASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 KRT17P1-201ENST00000399211 1546 ntBASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms