Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CFAP43Q8NDM7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 AC012615.1-201ENST00000565797 1299 ntBASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP43Q8NDM7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 NUS1P1-201ENST00000446295 882 ntBASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC29.73■■■□□ 2.35
CFAP43Q8NDM7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 AP002469.2-201ENST00000531724 424 ntBASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 AC120114.3-201ENST00000611923 658 ntBASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 AC034232.1-201ENST00000506026 1064 ntBASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CFAP43Q8NDM7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
CFAP43Q8NDM7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 GXYLT1P4-201ENST00000613576 1192 ntBASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC29.7■■■□□ 2.35
CFAP43Q8NDM7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
CFAP43Q8NDM7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CFAP43Q8NDM7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.34
CFAP43Q8NDM7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CFAP43Q8NDM7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.34
CFAP43Q8NDM7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
CFAP43Q8NDM7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CFAP43Q8NDM7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC29.69■■■□□ 2.34
CFAP43Q8NDM7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
CFAP43Q8NDM7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC29.69■■■□□ 2.34
CFAP43Q8NDM7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CFAP43Q8NDM7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CFAP43Q8NDM7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms