Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AL160286.2-201ENST00000567150 934 ntBASIC21.5■■□□□ 1.03
RETREG2Q8NC44 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AC010653.2-201ENST00000623505 997 ntBASIC21.5■■□□□ 1.03
RETREG2Q8NC44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AC096733.2-201ENST00000609937 1394 ntBASIC21.49■■□□□ 1.03
RETREG2Q8NC44 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 COX11P1-201ENST00000489116 835 ntBASIC21.49■■□□□ 1.03
RETREG2Q8NC44 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG2Q8NC44 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 YBX1P2-201ENST00000489612 999 ntBASIC21.48■■□□□ 1.03
RETREG2Q8NC44 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG2Q8NC44 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 AL031133.1-201ENST00000406807 723 ntBASIC21.47■■□□□ 1.03
RETREG2Q8NC44 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 AC007663.1-201ENST00000438948 1240 ntBASIC21.47■■□□□ 1.03
RETREG2Q8NC44 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.47■■□□□ 1.03
RETREG2Q8NC44 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms