Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 LSM12P1-201ENST00000411836 588 ntBASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 AC083906.6-201ENST00000641366 219 ntBASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 KRT8P8-201ENST00000434750 1448 ntBASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 KRT17P1-201ENST00000399211 1546 ntBASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 MIR638-201ENST00000385237 100 ntBASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 GPX1P1-201ENST00000388829 606 ntBASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 BID-214ENST00000617586 542 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 AC231657.2-201ENST00000624556 255 ntBASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC71LQ8N9Z2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71LQ8N9Z2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms