Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 MIPEPP3-201ENST00000412105 444 ntBASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AC091874.3-201ENST00000512672 1195 ntBASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AC120498.8-201ENST00000614275 531 ntBASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 AL133373.2-201ENST00000623187 2828 ntBASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01561Q8N1V8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ABALON-201ENST00000629058 1903 ntBASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AC124283.5-201ENST00000624661 1809 ntBASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AC004911.1-201ENST00000416316 871 ntBASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms