Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 AL512408.1-201ENST00000569378 2000 ntBASIC28.18■■■□□ 2.1
ABCA6Q8N139 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 NUS1P2-201ENST00000417358 873 ntBASIC28.17■■■□□ 2.1
ABCA6Q8N139 RPP21-221ENST00000428040 594 ntTSL 2 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 AF228730.7-201ENST00000641842 219 ntBASIC28.17■■■□□ 2.1
ABCA6Q8N139 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA6Q8N139 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
ABCA6Q8N139 KRT8P3-201ENST00000519669 1449 ntBASIC28.17■■■□□ 2.1
ABCA6Q8N139 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCA6Q8N139 AC073314.1-201ENST00000568729 2216 ntBASIC28.16■■■□□ 2.1
ABCA6Q8N139 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 NSUN5P1-202ENST00000421140 1535 ntBASIC28.16■■■□□ 2.1
ABCA6Q8N139 NSUN5P2-203ENST00000457352 1529 ntBASIC28.16■■■□□ 2.1
ABCA6Q8N139 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCA6Q8N139 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.16■■■□□ 2.1
ABCA6Q8N139 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC28.16■■■□□ 2.1
ABCA6Q8N139 AL773604.1-201ENST00000617417 272 ntBASIC28.16■■■□□ 2.1
ABCA6Q8N139 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 HOXB1-202ENST00000577092 1414 ntBASIC28.16■■■□□ 2.1
ABCA6Q8N139 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA6Q8N139 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 FICD-205ENST00000552758 603 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 Z69720.1-201ENST00000601483 472 ntBASIC28.15■■■□□ 2.1
ABCA6Q8N139 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
ABCA6Q8N139 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA6Q8N139 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA6Q8N139 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA6Q8N139 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA6Q8N139 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 AC090616.6-201ENST00000582640 721 ntBASIC28.14■■■□□ 2.1
ABCA6Q8N139 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA6Q8N139 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.14■■■□□ 2.1
ABCA6Q8N139 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC28.14■■■□□ 2.09
ABCA6Q8N139 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ABCA6Q8N139 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
ABCA6Q8N139 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
ABCA6Q8N139 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC28.14■■■□□ 2.09
ABCA6Q8N139 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 AC243591.1-201ENST00000452967 1364 ntBASIC28.13■■■□□ 2.09
ABCA6Q8N139 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA6Q8N139 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 AC104390.1-201ENST00000555663 520 ntBASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms