Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 AC093503.3-201ENST00000624917 2352 ntBASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 RCC2P6-201ENST00000526625 1557 ntBASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 RPS2P55-201ENST00000397318 883 ntBASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 AC091390.4-202ENST00000476426 537 ntBASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 AC107956.1-201ENST00000494359 873 ntBASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 CD177P1-201ENST00000606252 935 ntBASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC116Q8IYX3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 AC004951.3-201ENST00000418645 1148 ntBASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC116Q8IYX3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC116Q8IYX3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC116Q8IYX3 KRT8P11-201ENST00000409686 1436 ntBASIC17.89■□□□□ 0.46
CCDC116Q8IYX3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC116Q8IYX3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC116Q8IYX3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 AC011506.1-201ENST00000474329 610 ntBASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 AC011298.2-201ENST00000617989 482 ntBASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 AC130371.2-201ENST00000619443 611 ntBASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 AL020996.1-203ENST00000536896 2307 ntBASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC116Q8IYX3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 AC008040.2-201ENST00000461049 708 ntBASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 AC026271.3-201ENST00000571884 352 ntBASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms