Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 NUS1P2-201ENST00000417358 873 ntBASIC27.07■■□□□ 1.92
UBR1Q8IWV7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
UBR1Q8IWV7 AC073314.1-201ENST00000568729 2216 ntBASIC27.06■■□□□ 1.92
UBR1Q8IWV7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC27.06■■□□□ 1.92
UBR1Q8IWV7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
UBR1Q8IWV7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
UBR1Q8IWV7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC27.05■■□□□ 1.92
UBR1Q8IWV7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
UBR1Q8IWV7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC27.05■■□□□ 1.92
UBR1Q8IWV7 AC243591.1-201ENST00000452967 1364 ntBASIC27.04■■□□□ 1.92
UBR1Q8IWV7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 LINC01711-201ENST00000598340 967 ntBASIC27.04■■□□□ 1.92
UBR1Q8IWV7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBR1Q8IWV7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 AP003733.1-201ENST00000491725 852 ntBASIC27.03■■□□□ 1.92
UBR1Q8IWV7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC27.03■■□□□ 1.92
UBR1Q8IWV7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC27.02■■□□□ 1.92
UBR1Q8IWV7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms