Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 AK4P3-201ENST00000418260 669 ntBASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 KRT18P35-201ENST00000510488 1269 ntBASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 AL590326.2-201ENST00000625139 305 ntBASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 KRT8P45-201ENST00000414328 1447 ntBASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 AC139887.4-201ENST00000607877 719 ntBASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 AC141257.4-201ENST00000634557 245 ntBASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 AC136944.6-201ENST00000634818 245 ntBASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN4BQ8IWT1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 ARMC10P1-201ENST00000313754 855 ntBASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 AC117947.1-201ENST00000427448 529 ntBASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 AL512604.3-201ENST00000569583 964 ntBASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN4BQ8IWT1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SCN4BQ8IWT1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN4BQ8IWT1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCN4BQ8IWT1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCN4BQ8IWT1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN4BQ8IWT1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 TEX21P-204ENST00000641479 1693 ntBASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 AC008622.2-201ENST00000617006 1229 ntBASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 AC007952.6-201ENST00000573168 2673 ntBASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 AC003957.1-201ENST00000625108 2673 ntBASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN4BQ8IWT1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms