Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 AC073648.6-201ENST00000641589 218 ntBASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 AC124016.1-201ENST00000609552 612 ntBASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 AL138781.2-201ENST00000617896 1843 ntBASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00346Q8IVM7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 NEFHP1-201ENST00000412845 2629 ntBASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 KRT16P5-201ENST00000455284 522 ntBASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 CD99P1-205ENST00000527459 561 ntBASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00346Q8IVM7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 RN7SL471P-201ENST00000580476 299 ntBASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 AC104581.1-202ENST00000635932 2618 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms